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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6010472 chr22:49157038 A/T ASCC2 chr22:30184597-30234293:- 0.6 7.63 1.3E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T ATXN10 chr22:46067678-46241187:+ 0.68 8.13 3.63E-15 Box Plot
THCA rs6010472 chr22:49157038 A/T BRD1 chr22:50166931-50221160:- 0.53 6.47 2.37E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T C22orf13 chr22:24936406-24951903:- 0.54 6.61 1.02E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T C22orf23 chr22:38339057-38349676:- 0.5 6.12 1.96E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T C22orf28 chr22:32783562-32808274:- 0.43 6.03 3.19E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T C22orf30 chr22:32072242-32146120:- 0.45 6.84 2.42E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T C22orf32 chr22:42475699-42480287:+ 0.62 8.63 9.24E-17 Box Plot
THCA rs6010472 chr22:49157038 A/T C22orf39 chr22:19338891-19435755:- 0.55 6.5 2.07E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T C22orf40 chr22:46639911-46646193:- 0.5 7.12 3.94E-12 Box Plot
THCA rs6010472 chr22:49157038 A/T C22orf46 chr22:42084943-42094140:+ 0.71 6.75 4.39E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T CABIN1 chr22:24407642-24574596:+ 0.57 7.27 1.45E-12 Box Plot
THCA rs6010472 chr22:49157038 A/T CBX6 chr22:39257455-39268319:- 0.38 6.48 2.32E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T CBX7 chr22:39516172-39548679:- 0.47 6.66 7.72E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T CBY1 chr22:39052641-39069859:+ 0.64 8.52 2.14E-16 Box Plot